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Energy Unit: kcal/mole kJ/mole
 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMG-CoA) [ 27 ] HIV-1 Protease Mutant, MDR-HM [ 9 ]
 Ab N1G9 [ 4 ] HIV-1 Protease Mutant, MDR-QM [ 9 ]
 Acetate Operon Repressor (C-IclR) [ 2 ] HIV-1 Protease Mutant, NAM-10 [ 4 ]
 Acetate Operon Repressor (IclR) [ 2 ] hRXRα-LBD⋅9cRA [ 3 ]
 ADC-7 beta-lactamase (ADC-7) [ 2 ] hRXRα-LBD⋅9cUAB30 [ 3 ]
 Aldose Reductase (ALR2) Mutant (L300P) [ 2 ] hRXRα-LBD⋅Targretin [ 3 ]
 Aldose reductase (AR) [ 6 ] HyHEL-10 [ 3 ]
 Alpha-fucosidase [ 8 ] HyHEL-10 Fv Mutant (HD32A) [ 1 ]
 apocytochrome b562 [ 2 ] HyHEL-10 Fv Mutant (HD32E) [ 1 ]
 Bak [ 1 ] HyHEL-10 Fv Mutant (HD32N) [ 1 ]
 Bid (34-mer) [ 1 ] HyHEL-10 Mutant (AEAF) [ 2 ]
 Bim [ 1 ] HyHEL-10 Mutant (ETKF) [ 2 ]
 BirA Bifunctional Protein [ 7 ] HyHEL-10 Mutant (HY58A) [ 2 ]
 BirA Bifunctional Protein Mutant (V214A) [ 3 ] HyHEL-10 Mutant (HY58F) [ 2 ]
 BirA Bifunctional Protein Mutant (V219A) [ 3 ] HyHEL-10 Mutant (SFSF) [ 2 ]
 BirA Bifunctional Protein Mutant (W223A) [ 3 ] HyHEL-5 Fab [ 2 ]
 Bmf [ 1 ] HyHEL-5 Mutant(E50D) [ 2 ]
 C-terminal-binding protein 1 (CtBP1) [ 3 ] HyHEL-5 Mutant(E50Q) [ 2 ]
 C-terminal-binding protein 2 (CtBP2) [ 2 ] Induced myeloid leukemia cell differentiation protein Mcl-1 homolog [ 10 ]
 CAM-alpha-lactalbumin [ 6 ] Inositol 1,3,4,5,6-pentakisphosphate 2-kinase (IPK1) [ 5 ]
 CAM-BPTI [ 5 ] Intestinal fatty acid-binding protein (hIFABP) [ 6 ]
 CAM-RNase A [ 4 ] iso-1-cytochrome c (Cc) [ 13 ]
 cAMP-activated global transcriptional regulator CRP [ 12 ] JNK2/JNK3 [ 1 ]
 Caseinolytic protein C1 (ClpC1 NTD E89A) [ 1 ] Leucyl-tRNA synthetase (LeuRS) [ 1 ]
 Caseinolytic protein C1 (ClpC1 NTD E89Q) [ 1 ] Leucyl-tRNA synthetase K510A mutant (K510A) [ 1 ]
 Caseinolytic protein C1 (ClpC1 NTD F2A) [ 1 ] Leucyl-tRNA synthetase K510E mutant (K510E) [ 1 ]
 Caseinolytic protein C1 (ClpC1 NTD F2Y) [ 1 ] Lipoxygenase type I-B (LOX) [ 4 ]
 Caseinolytic protein C1 (ClpC1 NTD F80A) [ 1 ] LNoxaB [ 1 ]
 Caseinolytic protein C1 (ClpC1 NTD F80Y) [ 1 ] Lysozyme (bobwhite quail) [ 3 ]
 Caseinolytic protein C1 (ClpC1 NTD) [ 1 ] Lysozyme (hen egg) [ 59 ]
 Caseinolytic protein C1 (ClpC1 NTD-D1) [ 1 ] Lysozyme (turkey egg) [ 6 ]
 Caseinolytic protein C1 (ClpC1) [ 1 ] LysP-related transporter STM2200 (STM2200) [ 4 ]
 Caspase-3 [ 8 ] Major Urinary Protein (MUP-1) [ 8 ]
 Caspase-3|IST-1 Complex [ 1 ] MAP kinase ERK1 [ 1 ]
 Conantokin-G [ 6 ] MAP kinase ERK2 [ 2 ]
 Conantokin-T [ 4 ] MAP Kinase p38 alpha [ 5 ]
 Cyclin-dependent protein kinase 2 (CDK2 WT) [ 1 ] Mcl-1 (residues 172-327) [ 6 ]
 Cyclin-dependent protein kinase 2 variant (CDK2 A144C) [ 1 ] Methylthioadenosine Phosphorylase (MTAP) [ 22 ]
 Cyclin-dependent protein kinase 2 variant (CDK2 C118L) [ 1 ] Mitogen-Activated Protein Kinase 9 (JNK2) Mutant (C162S) [ 1 ]
 Cyclin-dependent protein kinase 2 variant (CDK2 C118L/A144C) [ 1 ] Mitogen-Activated Protein Kinase 9 (JNK2) Mutant (R127A) [ 1 ]
 Cytochrome P450 2B4 [ 2 ] NoxaA [ 1 ]
 Cytochrome P450 2B4 Mutant (F206A) [ 2 ] NoxaB [ 1 ]
 Cytochrome P450 Reductase (CPR) [ 5 ] NoxaB Mutant (E74F) [ 1 ]
 D1.3 Fv [ 3 ] Outer Membrane Phospholipase A [ 2 ]
 D1.3 mAb [ 1 ] Pantothenate synthetase [ 5 ]
 D11.15 Fab [ 2 ] peptide ENIFPLE [ 6 ]
 D11.15 Fv [ 1 ] peptide HIPPEN [ 7 ]
 D11.15 mAb [ 2 ] peptide HIPPENIFPLE [ 9 ]
 D44.1 Fab [ 3 ] Phosphoehtnaolamine Methyltransferases 1 (PMT1) [ 18 ]
 D44.1 mAb [ 4 ] Phosphoehtnaolamine Methyltransferases 2 (PMT2) [ 9 ]
 DNA [ 3 ] PLD alpha C2 [ 1 ]
 DNA (D12CA) [ 1 ] PLD beta C2 [ 2 ]
 DNA (D12CC) [ 1 ] PNA (P12) [ 4 ]
 DNA (D12CG) [ 1 ] PNA (P9CT) [ 1 ]
 DNA (D12CT) [ 1 ] PNA (P9GT) [ 1 ]
 DNA (D9AA) [ 1 ] PNA (P9TT) [ 1 ]
 DNA (D9AC) [ 1 ] PNA(P9) [ 5 ]
 DNA (D9AG) [ 1 ] Puma [ 1 ]
 DNA (D9AT) [ 5 ] Puma Mutant (M144I) [ 1 ]
 DNA Gyrase [ 4 ] Purine nucleoside phosphorylase [ 40 ]
 DNA(calf thymus) [ 2 ] pY317 (phosphotyrosine polypeptide) [ 5 ]
 Enoyl-ACP Reductase (FabI) [ 13 ] pY317 N(+2)A [ 1 ]
 Enoyl-ACP Reductase (FabI) Mutant (F203L) [ 9 ] pY317 Q(+4)A [ 1 ]
 Estrogen-Related Receptor, alpha [ 1 ] pY317 S(-1)A [ 1 ]
 Estrogen-Related Receptor, alpha Mutant (C325S) [ 1 ] pY317 V(+1)A [ 1 ]
 F9.13.7 Fab [ 4 ] pY317 V(+3)A [ 1 ]
 F9.13.7 mAb [ 4 ] Quinone Reductase 2 (QR2) [ 3 ]
 FAD-Binding Domain [ 1 ] Renin [ 11 ]
 Farnesyl Diphosphate Synthase (FPPS) [ 11 ] Rho Transcription Termination Factor [ 3 ]
 ferricytochrome c peroxidase (CcP) [ 13 ] RNA(23-mer) [ 9 ]
 Gcn5-related N-acetyltransferases (GNAT) superfamily protein PA4794 (PA4794) [ 7 ] sc1E3 [ 9 ]
 Glyoxylate Regulatory Protein (C-AllR) [ 1 ] SecB [ 15 ]
 Grb2-SH2 [ 10 ] Serine/threonine-protein kinase Aurora-A [ 10 ]
 Grp78 [ 6 ] Serine/threonine-protein kinase Aurora-B [ 3 ]
 Guanylyl Cyclase C receptor mAb [ 22 ] Serine/threonine-protein kinase PIM [ 9 ]
 H1/H5-depleted chromatin [ 2 ] Serine/threonine-protein kinase SRPK1 [ 1 ]
 Haspin (465-798) [ 1 ] Streptavadin(N23A) [ 2 ]
 Heat Shock Protein 90 (Hsp90) [ 29 ] Streptavadin(N23E) [ 2 ]
 hIL-1beta [ 9 ] Streptavadin(S27A) [ 2 ]
 Histidine-binding periplasmic protein (HisJ) [ 1 ] Streptavadin(Y43A) [ 2 ]
 Histone deacetylase 8 (HDAC8) [ 6 ] Streptavidin [ 2 ]
 HIV-1 Nef [ 5 ] Streptavidin (Y43F) [ 2 ]
 HIV-1 Protease [ 17 ] Thrombin [ 19 ]
 HIV-1 Protease A Subtype [ 5 ] Thymidine Kinase [ 8 ]
 HIV-1 Protease A Subtype Mutant (V82F/I84V) [ 5 ] Thymidine Kinase (TK.dT) [ 4 ]
 HIV-1 Protease B Subtype [ 5 ] Transcriptional Regulator TtgR [ 19 ]
 HIV-1 Protease B Subtype Mutant (V82F/I84V) [ 5 ] Transcriptional Regulator TtgR Mutant R176G [ 2 ]
 HIV-1 Protease C Subtype [ 5 ] Transcriptional Regulator TtgR-DNA [ 4 ]
 HIV-1 Protease C Subtype Mutant (V82F/I84V) [ 5 ] tRNA synthetase (GlyRS) [ 4 ]
 HIV-1 Protease Mutant (L10I/L90M) [ 9 ] Trypsin [ 30 ]
 HIV-1 Protease Mutant (M46I/I54V) [ 9 ] v-Src SH2 Domain [ 4 ]
 HIV-1 Protease Mutant (V82A/I84V) [ 9 ] vnd/NK-2 HD [ 1 ]
 HIV-1 Protease Mutant (V82F/I84V) [ 4 ] vnd/NK-2 HD Mutant (H52R/T56W) [ 1 ]
 HIV-1 Protease Mutant, A-1 [ 4 ] vnd/NK-2 HD Mutant(H52R) [ 1 ]
 HIV-1 Protease Mutant, ANAM-11 [ 4 ] XIAP-BIR3 [ 2 ]