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4DKO:
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with TS-II-224
PDB ID:
4DKO
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MMDB ID:
99243
PDB Deposition Date:
2012/2/3
Updated in MMDB:
2023/09
Experimental Method:
x-ray diffraction
Resolution:
1.981 Å
Source Organism:
Human immunodeficiency virus type 1 (BRU ISOLATE)
Similar Structures:
VAST+
Download sequence data
Biological Unit for 4DKO: monomeric; determined by author and by software (PISA)
Molecular Components in 4DKO
Label
Count
Molecule
Protein (1 molecule)
A
1
Hiv-1 Gp120 Core
Chemicals and Non-standard biopolymers (15 molecules)
1
13
2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3
1
N-(4-chloro-3-fluorophenyl)-N'-(1,2,2,6,6-pentamethylpiperidin-4-yl)ethanediamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303