3PMH: Mechanism of Sulfotyrosine-Mediated Glycoprotein Ib Interaction with Two Distinct alpha-Thrombin Sites

PDB ID: 3PMHDownload
MMDB ID: 90980
PDB Deposition Date: 2010/11/16
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 3.2  Å
Source Organism:
Similar Structures:
Biological Unit for 3PMH: trimeric; determined by author
Molecular Components in 3PMH
Label Count Molecule
Proteins (3 molecules)
1
Thrombin Alpha-chain
(Gene symbol: F2)
Molecule annotation
1
Thrombin Beta-chain
(Gene symbol: F2)
Molecule annotation
1
Platelet Glycoprotein IB Alpha Chain
(Gene symbol: GP1BA)
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
3
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
3
alpha-D-mannopyranosealpha-D-mannopyranose
3
1
D-phenylalanyl-N-[(3S)-6-carbamimidamido-1-chloro-2-oxohexan-3-yl]-L-prolinamideD-phenylalanyl-N-[(3S)-6-carbamimidamido-1-chloro-2-oxohexan-3-yl]-L-prolinamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303