2YFJ: Crystal structure of Biphenyl dioxygenase variant RR41 with dibenzofuran

PDB ID: 2YFJDownload
MMDB ID: 91155
PDB Deposition Date: 2011/4/6
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.15  Å
Source Organism:
Similar Structures:
Biological Unit for 2YFJ: hexameric; determined by author and by software (PISA)
Molecular Components in 2YFJ
Label Count Molecule
Proteins (6 molecules)
3
Biphenyl Dioxygenase Subunit Alpha
(Gene symbol: BXE_RS42315)
Molecule annotation
3
Biphenyl Dioxygenase Subunit Beta
(Gene symbol: BXE_RS42310)
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
3
FE2/S2 (INORGANIC) CLUSTERFE2/S2 (INORGANIC) CLUSTER
2
3
FE (II) IONFE (II) ION
3
3
DIBENZOFURANDIBENZOFURAN
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303