Reaction Details Report a problem with these data
Target
DNA ligase
Ligand
BDBM22986
Substrate
32P-labeled nicked duplex DNA substrate
Meas. Tech.
In Vitro Ligase Activity Assay
pH
7.6±n/a
Temperature
298.15±n/a K
IC50
204000±7000 nM
Citation
 Srivastava, SK; Dube, D; Kukshal, V; Jha, AK; Hajela, K; Ramachandran, R NAD+-dependent DNA ligase (Rv3014c) from Mycobacterium tuberculosis: novel structure-function relationship and identification of a specific inhibitor. Proteins 69:97-111 (2007) [PubMed]  Article 
Target
Name:
DNA ligase
Synonyms:
30 | ATP-dependent DNA ligase | Bacteriophage T4 DNA Ligase | DNLI_BPT4 | Polydeoxyribonucleotide synthase [ATP]
Type:
Enzyme
Mol. Mass.:
55291.48
Organism:
Bacteriophage T4
Description:
n/a
Residue:
487
Sequence:
MILKILNEIASIGSTKQKQAILEKNKDNELLKRVYRLTYSRGLQYYIKKWPKPGIATQSFGMLTLTDMLDFIEFTLATRKLTGNAAIEELTGYITDGKKDDVEVLRRVMMRDLECGASVSIANKVWPGLIPEQPQMLASSYDEKGINKNIKFPAFAQLKADGARCFAEVRGDELDDVRLLSRAGNEYLGLDLLKEELIKMTAEARQIHPEGVLIDGELVYHEQVKKEPEGLDFLFDAYPENSKAKEFAEVAESRTASNGIANKSLKGTISEKEAQCMKFQVWDYVPLVEIYSLPAFRLKYDVRFSKLEQMTSGYDKVILIENQVVNNLDEAKVIYKKYIDQGLEGIILKNIDGLWENARSKNLYKFKEVIDVDLKIVGIYPHRKDPTKAGGFILESECGKIKVNAGSGLKDKAGVKSHELDRTRIMENQNYYIGKILECECNGWLKSDGRTDYVKLFLPIAIRLREDKTKANTFEDVFGDFHEVTGL
  
Inhibitor
Name:
BDBM22986
Synonyms:
18-[6-(piperidin-1-yl)hexyl]-8-thia-18-azatetracyclo[9.7.0.0^{2,7}.0^{12,17}]octadeca-1(11),2(7),3,5,12(17),13,15-heptaene | N-substituted tetracyclic indole | Tetracyclic indole derivative, 5
Type:
Small organic molecule
Emp. Form.:
C27H34N2S
Mol. Mass.:
418.637
SMILES:
C(CCCn1c-2c(CCSc3ccccc-23)c2ccccc12)CCN1CCCCC1
Structure:
Search PDB for entries with ligand similarity:
Substrate
Name:
32P-labeled nicked duplex DNA substrate
Synonyms:
n/a
Type:
Duplex DNA
Mol. Mass.:
3295.68
Organism:
n/a
Description:
n/a
Residue:
40
Sequence:
ATGTCCAGTGATCCAGCTAAGGTACGAGTCTATGTCCAGG