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Cell Reactant:
tRNA synthetase (GlyRS)
Syringe Reactant:
BDBM18135
Meas. Tech.:
Isothermal Titration Calorimetry
Entry Date.:
10/01/07
ΔG°:
-36.3±0.4 (kJ/mole)
pH:
7.2±n/a
Log10Kb:
5.5
Temperature:
298±n/a (K)
ΔHobs :
-70.7±2.2 (kJ/mole)
Corrected for ΔHioniz:
yes
Stoich. Param.:
1.09
ΔS° :
-0.1064±0.0201 (kJ/mole-K)
Citation
 Dignam, JD; Nada, S; Chaires, JB Thermodynamic characterization of the binding of nucleotides to glycyl-tRNA synthetase. Biochemistry 42:5333-40 (2003) [PubMed]  Article
Cell React
Source:
Protein was expressed and purified from E. coli.
Prep. Method:
Enzyme was purified by affinity chromatography.
Name:
Glycine--tRNA ligase
Synonyms:
GARS_BOMMO | GlyRS | Glycine--tRNA ligase | Glycyl-tRNA synthetase | tRNA synthetase (GlyRS)
Type:
Enzyme
Mol. Mass.:
76917.70
Organism:
Bombyx mori
Description:
B. mori glycyltRNA synthetase was expressed in E. coli.
Residue:
680
Sequence:
MADPKIEEILAPLRANVKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILEDKELSLAPAEDLFDRAKMEDLIKRRFFYDQSFAIYGGITGQFDFGPMGCALKSNMIHLWKKFFILQEQMLEVECSILTPEPVLKASGHVERFADLMTKDIKTGECFRLDHLIKGHLEKIKSDKNTKIELKAEIEDILIKLDGMNADEMSALMKRFEMKSPISGNDLTPPIEFNLMFNTQIGPSGLVKGFLRPETAQGIFVNFKRLLEFNQGRLPFAAAQIGNSFRNEISPRSGLLRVREFTMCEIEHFCDVKEHPKFESVKNTQSLLYSADNQEQGKPADLTTIGDAVCKGIVNNETLGYFMARIHMYMLAVGIDPKRLRFRQHMGNEMAHYACDCWDAECLSSYGWIECVGCADRSAYDLTQHTKATGIRLAAEKKLPAPKQIEVVEAIANNGRIGKAFKKDSQAINDTLATLDNAALEEMQKELDSNGEYTLITARGEFKLTPSLVNVKKTQKTIHVEEIIPSVIEPSFGVGRILYCILEHNFRMREGDEQRTYFSLPPTVAPMKCVVLPLSGNAEFQPFVRDLSQELITVDVSHKVDDSSGSIGRRYARTDELGVPYAVTVDFDTIKEPHTVTLRERDSMRQVRLPMADVPTVVRDLSNSKILWSDVEQKYPKFEQQETVKGTSV
  
Syringe React
Source:
Sigma-Aldrich
Name:
BDBM18135
Synonyms:
({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}methyl)phosphonic acid | AMPPCP | ATP,Beta Gamma-me | CHEMBL133463 | adenylylmethylenediphosphonate
Type:
Nucleoside or nucleotide
Emp. Form.:
C11H18N5O12P3
Mol. Mass.:
505.2082
SMILES:
Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP(O)(=O)OP(O)(=O)CP(O)(O)=O)[C@@H](O)[C@H]1O |r|
Structure:
Search PDB for entries with ligand similarity: