Target
5'-AMP-activated protein kinase catalytic subunit alpha-2/subunit beta-1/subunit gamma-1
Ligand
BDBM213203
Substrate
BDBM213211
Meas. Tech.
In Vitro AMPK Activation Assay
pH
7.3±n/a
EC50
4±n/a nM
Comments
extracted
Citation
 Apgar, JMArasappan, ABiftu, TChen, PFeng, DGuidry, EHicks, JDKekec, ALeavitt, KJLi, BMcCracken, TSebhat, IQian, XWei, LWilkening, RRWu, Z Azabenzimidazole hexahydrofuro[3,2-b]furan derivatives US Patent  US9290517 Publication Date 3/22/2016 
Target
Name:
5'-AMP-activated protein kinase catalytic subunit alpha-2/subunit beta-1/subunit gamma-1
Synonyms:
AMPK alpha2/beta1/gamma1 | AMPK complex 7 (alpha-2,beta-1,gamma-1) | AMPK complex 7 (containing alpha-2, beta-1, gamma-1)
Type:
n/a
Mol. Mass.:
n/a
Description:
ASSAY_ID of ChEMBL is 1970361
Components:
This complex has 3 components.
Component 1
Name:
5'-AMP-activated protein kinase catalytic subunit alpha-2
Synonyms:
AAPK2_HUMAN | ACACA kinase | AMP-activated protein kinase, alpha-2 subunit | AMPK | AMPK subunit alpha-2 | AMPK-alpha2 | AMPK2 | Acetyl-CoA carboxylase kinase | Hydroxymethylglutaryl-CoA reductase kinase | PRKAA2
Type:
Enzyme
Mol. Mass.:
62331.02
Organism:
Homo sapiens (Human)
Description:
P54646
Residue:
552
Sequence:
MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDQLAVAYHLIIDNRRIMNQASEFYLASSPPSGSFMDDSAMHIPPGLKPHPERMPPLIADSPKARCPLDALNTTKPKSLAVKKAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVVNAYHLRVRRKNPVTGNYVKMSLQLYLVDNRSYLLDFKSIDDEVVEQRSGSSTPQRSCSAAGLHRPRSSFDSTTAESHSLSGSLTGSLTGSTLSSVSPRLGSHTMDFFEMCASLITTLAR
  
Component 2
Name:
5'-AMP-activated protein kinase subunit gamma-1
Synonyms:
5'-AMP-activated protein kinase subunit gamma-1 | AAKG1_HUMAN | AMP-activated protein kinase, gamma-1 subunit | AMPK alpha2/beta2/gamma1 | AMPK gamma-1 | AMPK gamma1 | AMPK subunit gamma-1 | AMPKg | PRKAG1
Type:
n/a
Mol. Mass.:
37581.44
Organism:
Homo sapiens (Human)
Description:
P54619
Residue:
331
Sequence:
METVISSDSSPAVENEHPQETPESNNSVYTSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVLTGGEKKP
  
Component 3
Name:
5'-AMP-activated protein kinase subunit beta-1
Synonyms:
5'-AMP-activated protein kinase subunit beta-1 | AAKB1_HUMAN | AMP-activated protein kinase alpha-2/beta-1/gamma-3 | AMPK | AMPK subunit beta-1 | AMPKb | PRKAB1
Type:
n/a
Mol. Mass.:
30380.94
Organism:
Homo sapiens (Human)
Description:
Q9Y478
Residue:
270
Sequence:
MGNTSSERAALERHGGHKTPRRDSSGGTKDGDRPKILMDSPEDADLFHSEEIKAPEKEEFLAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNWSKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI
  
Inhibitor
Name:
BDBM213203
Synonyms:
US9290517, 138
Type:
Small organic molecule
Emp. Form.:
C26H20ClN5O6
Mol. Mass.:
533.92
SMILES:
O[C@@H]1CO[C@@H]2[C@@H](CO[C@H]12)Oc1nc2nc(c(Cl)cc2[nH]1)-c1ccc(cc1)-c1ccc(cc1)-c1noc(=O)[nH]1 |r|
Structure:
Search PDB for entries with ligand similarity:
Substrate
Name:
BDBM213211
Synonyms:
US9290517, SAMS
Type:
Fluorescent Substrate
Emp. Form.:
C74H131N29O18S2
Mol. Mass.:
1779.145
SMILES:
CSCC[C@H](NC(=O)[C@H](C)NC(=O)[C@H](CO)NC(=O)[C@H](CCCN=C(N)N)NC(=O)[C@H](CCSC)NC(=O)[C@@H](N)Cc1cnc[nH]1)C(=O)N[C@@H](CO)C(=O)NCC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](Cc1cnc[nH]1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCN=C(N)N)C(=O)N[C@@H](CCCN=C(N)N)C(O)=O |wU:85.86,101.102,67.67,13.15,30.34,4.4,wD:77.78,92.93,59.59,112.113,19.26,49.49,38.38,8.8,(3.08,3.37,;4.41,2.6,;4.41,1.06,;5.75,.29,;5.75,-1.25,;4.41,-2.02,;7.8,-12.8,;7.8,-14.34,;9.14,-12.03,;9.14,-10.49,;10.47,-12.8,;12.01,-12.03,;12.01,-10.49,;13.34,-12.8,;13.34,-14.34,;12.01,-15.11,;14.68,-12.03,;16.22,-12.8,;16.22,-14.34,;17.55,-12.03,;17.55,-10.49,;16.22,-9.72,;14.88,-10.49,;13.55,-9.72,;13.55,-8.18,;12.22,-7.41,;14.88,-7.41,;18.89,-12.8,;20.43,-12.03,;20.43,-10.49,;21.76,-12.8,;21.76,-14.34,;20.43,-15.11,;20.43,-16.65,;21.76,-17.42,;23.09,-12.03,;24.63,-12.8,;24.63,-14.34,;25.97,-12.03,;27.3,-12.8,;25.97,-10.49,;27.3,-9.72,;27.46,-8.19,;28.97,-7.87,;29.74,-9.2,;28.71,-10.34,;7.08,-2.02,;7.08,-3.56,;8.62,-1.25,;9.95,-2.02,;9.95,-3.56,;11.29,-4.33,;11.29,-1.25,;11.29,.29,;12.83,-2.02,;14.16,-1.25,;15.5,-2.02,;15.5,-3.56,;17.04,-1.25,;18.37,-2.02,;18.37,-3.56,;19.7,-4.33,;19.7,-5.87,;21.04,-3.56,;19.7,-1.25,;19.7,.29,;21.24,-2.02,;22.58,-1.25,;22.58,.29,;23.91,1.06,;25.32,.44,;26.35,1.58,;25.58,2.91,;24.07,2.59,;23.91,-2.02,;23.91,-3.56,;27.3,8.76,;25.97,9.53,;25.97,11.07,;27.3,11.84,;27.3,13.38,;28.63,11.07,;24.63,8.76,;24.63,7.22,;23.09,9.53,;21.76,8.76,;21.76,7.22,;20.43,6.45,;23.09,6.45,;20.43,9.53,;20.43,11.07,;18.89,8.76,;17.55,9.53,;17.55,11.07,;16.22,11.84,;16.22,13.38,;14.88,14.15,;14.88,15.69,;16.22,8.76,;16.22,7.22,;14.68,9.53,;13.34,8.76,;13.34,7.22,;12.01,6.45,;10.68,7.22,;9.34,6.45,;9.34,4.91,;8.01,4.14,;10.68,4.14,;12.01,9.53,;12.01,11.07,;10.47,8.76,;9.14,9.53,;9.14,11.07,;7.8,11.84,;7.8,13.38,;6.47,14.15,;6.47,15.69,;5.14,16.46,;7.8,16.46,;7.8,8.76,;6.47,9.53,;7.8,7.22,)|
Structure:
Search PDB for entries with ligand similarity: