3AVY: Structure of viral RNA polymerase complex 6

PDB ID: 3AVYDownload
MMDB ID: 96480
PDB Deposition Date: 2011/3/8
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.616  Å
Source Organism:
Similar Structures:
Biological Unit for 3AVY: trimeric; determined by author and by software (PISA)
Molecular Components in 3AVY
Label Count Molecule
Protein (1 molecule)
1
Elongation Factor TS, Elongation Factor TU, Linker, Q Beta Replicase
(Gene symbol: tuf)
Molecule annotation
Nucleotides(2 molecules)
1
RNA (5'-r(*gp*gp*gp*up*cp*cp*ap*up*ap*ap*ap*ap*u)-3')
Molecule annotation
1
RNA (5'-r(*ap*ap*cp*gp*ap*up*up*up*up*ap*up*gp*gp*ap*cp*cp*cp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE
2
2
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303