Design and synthesis of novel proline based factor XIa selective inhibitors as leads for potential new anticoagulants

Bioorg Med Chem Lett. 2020 Aug 15;30(16):127072. doi: 10.1016/j.bmcl.2020.127072. Epub 2020 Feb 29.

Abstract

A series of 4, 4-disubstituted proline analogs were designed, synthesized, and tested for selective inhibition of blood coagulation factor XIa in search of new non-vitamin K antagonists based oral anticoagulants for potential prevention and treatment of thrombotic diseases. Starting from a potent thrombin (FIIa) inhibitor chemotype with FIIa IC50 = 1 nM and FXIa IC50 = 160 nM, medicinal chemistry iterations guided by molecular modeling and structure-based drug design led to steady improvement of FXIa potency while dialing down thrombin activity and improving selectivity. Through this exercise, a thousand-fold enhancement of selectivity over thrombin was achieved with some analogs carrying factor XIa inhibition potencies in the 10 nM range. In this communication, we discuss the design principles and structure activity relationship (SAR) of these novel FXIa selective inhibitors.

Keywords: Anticoagulants; Factor XIa (FXIa) inhibitor; Proline analogs; Thrombin (FIIa); Thrombosis.

MeSH terms

  • Anticoagulants / chemical synthesis
  • Anticoagulants / chemistry
  • Anticoagulants / pharmacology*
  • Dose-Response Relationship, Drug
  • Drug Design*
  • Factor XIa / antagonists & inhibitors*
  • Factor XIa / metabolism
  • Humans
  • Molecular Structure
  • Proline / chemical synthesis
  • Proline / chemistry
  • Proline / pharmacology*
  • Structure-Activity Relationship

Substances

  • Anticoagulants
  • Proline
  • Factor XIa